NASC Stock Detail Page
NASC ID: N630206
Name: SALK_130206
ABRC stock number: SALK_130206
Description: Sequence-indexed T-DNA insertion line generated by vacuum infiltration of Columbia (Col) plants with Agrobacterium tumefaciens vector pROK2; kanamycin was employed for selection of plants carrying a T-DNA (please note that in many lines, the kan resistance trait has been cosuppressed, so that insertion plants may not be kanamycin resistant); each T1 transformant has been maintained individually at SALK; the DNA sequence of each T-DNA flanking region was generated from seedlings grown from the same sample of seeds as that provided for distribution (T3). NOTE: kanamycin resistance gene may be silenced; PCR- or hybridization-based segregation analysis is required to confirm presence of insertion; may be segregating for phenotypes that are not linked to the insertion; may have additional insertions potentially segregating. Please cite the Alonso et al. reference linked to this stock and acknowledge NASC/ABRC for distributing the seeds in all presentations and publications utilizing this material. February 2003 TAIR gene annotation - At1g50140 F2J10.1 I ntron F2J10.1 I ntron. Single, segregating flank-tagged T3-generation T-DNA lines generated by vacuum infiltration of Columbia (Col) plants with Agrobacterium tumefaciens vector pROK2. Associated Polymorphisms: SALKseq_130206.0 : Genbank Annotation 2015-02-18 - This genomic-terminal sequence of a TDNA insertion region lies within the CDS of AT1G50140.1 (at chr 1 pos 18570117 (C/18570117-18570163) on the TAIR10). The sequences' 1-47 bps mapped on the genome, 48-74 bps onto the T-DNA. Pools P 35, R 33, C 31 N 40. The insertion site is at the 3' end of the sequence mapping.. Genbank Acc. KO373805. SALKseq_130206.1 : Genbank Annotation 2015-02-18 - This genomic-terminal sequence of a TDNA insertion region lies within the Intergenic between AT3G29780.1=UTR3 and AT3G29781.1=P355 (at chr 3 pos 11675686 (W/11675646-11675686) on the TAIR10). The sequences' 1-41 bps mapped on the genome, 56-78 bps onto the T-DNA. Pools P 35, R 33, C 31 N 40. The insertion site is at the 3' end of the sequence mapping.. Genbank Acc. KO377157. SALKseq_130206.2 : Genbank Annotation 2015-02-18 -This genomic-terminal sequence of a TDNA insertion region lies within the CDS of AT3G07360.1 (at chr 3 pos 2356210 (W/2356165-2356210) on the TAIR10). The sequences' 1-46 bps mapped on the genome, 61-78 bps onto the T-DNA. Pools P 35, R 33, C 31 N 40. The insertion site is at the 3' end of the sequence mapping.. Genbank Acc. KO380504.
Donation Date: 2003-03-11
Donated by: | The Salk Institute for Biological Studies Joseph R. Ecker |
Donor Number: SALK_130206
Part of : SALK lines
Stock type: individual line
Material type: seed
Comment: Homozygous/confirmed line: SALK_130206C.
Status | Price (£) |
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Available | £11.00 |
Germplasm Info
Mutagen: ema
Background: Col-0 (N60000)
Segregation status: segregating
Transformation method: Vacuum infiltration of Columbia (Col) plants with Agrobacterium tumefaciens vector pROK2
Associated Polymorphisms
When available, select a locus to display it at the AIP or view the EMBL record at the EBI.
Gene: | Allele: | Locus: | AGI code: |
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References
Alonso, J.M. et al. 2003. Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science 301(5633):653-7.PubMed ID: 12893945.