NASC Stock Detail Page
NASC ID: N639289
Name: SALK_139289
ABRC stock number: SALK_139289
Description: Sequence-indexed T-DNA insertion line generated by vacuum infiltration of Columbia (Col) plants with Agrobacterium tumefaciens vector pROK2; kanamycin was employed for selection of plants carrying a T-DNA (please note that in many lines, the kan resistance trait has been cosuppressed, so that insertion plants may not be kanamycin resistant); each T1 transformant has been maintained individually at SALK; the DNA sequence of each T-DNA flanking region was generated from seedlings grown from the same sample of seeds as that provided for distribution (T3). NOTE: kanamycin resistance gene may be silenced; PCR- or hybridization-based segregation analysis is required to confirm presence of insertion; may be segregating for phenotypes that are not linked to the insertion; may have additional insertions potentially segregating. Please cite the Alonso et al. reference linked to this stock and acknowledge NASC/ABRC for distributing the seeds in all presentations and publications utilizing this material. February 2003 TAIR gene annotation - At4g10740 T12H20. 5 R300-5' At4g10750 T12H20.10 L300-5' T12H20. 5 R300-5' At4g10750 T12H20.10 L300-5'. Single, segregating flank-tagged T3-generation T-DNA lines generated by vacuum infiltration of Columbia (Col) plants with Agrobacterium tumefaciens vector pROK2. Associated Polymorphisms: SALKseq_139289.0 : Genbank Annotation 2015-02-18 - This genomic-terminal sequence of a TDNA insertion region lies within the Promoter 500bps of AT4G10750.1 (at chr 4 pos 6618661 (W/6618600-6618661) on the TAIR10). The sequences' 1-62 bps mapped on the genome, 56-79 bps onto the T-DNA. Pools P 6, R 10, C 3 N 7. The insertion site is at the 3' end of the sequence mapping.. Genbank Acc. KO354146. SALKseq_139289.1 : Genbank Annotation 2015-02-18 - This genomic-terminal sequence of a TDNA insertion region lies within the Promoter 500bps of AT1G62035 (at chr 1 pos 22930492 (C/22930492-22930552) on the TAIR10). The sequences' 1-61 bps mapped on the genome, 58-79 bps onto the T-DNA. Pools P 6, R 10, C 3 N 7. The insertion site is at the 3' end of the sequence mapping.. Genbank Acc. KO347460. SALKseq_139289.2 : Genbank Annotation 2015-02-18 -This genomic-terminal sequence of a TDNA insertion region lies within the Intergenic between AT1G24380.1 and AT1G24388.1 (around chr 1 pos 8647761 on the TAIR10). The insertion site is at the 3' end of the sequence mapping.. Genbank Acc. KO416610.
Donation Date: 2003-03-11
Donated by: | The Salk Institute for Biological Studies Joseph R. Ecker |
Donor Number: SALK_139289
Part of : SALK lines
Stock type: individual line
Material type: seed
Status | Price (£) |
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Available | £11.00 |
Germplasm Info
Mutagen: ema
Background: Col-0 (N60000)
Segregation status: segregating
Transformation method: Vacuum infiltration of Columbia (Col) plants with Agrobacterium tumefaciens vector pROK2
Associated Polymorphisms
When available, select a locus to display it at the AIP or view the EMBL record at the EBI.
Gene: | Allele: | Locus: | AGI code: |
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References
Alonso, J.M. et al. 2003. Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science 301(5633):653-7.PubMed ID: 12893945.